[MMTK] Creating peptide from scratch

Sabine Reisser sabine.reisser at kit.edu
Thu May 31 13:54:57 UTC 2012


Hi,

i would like to create a peptide structure from scratch, basically 
defining the amino acid sequence and the termini (cyclic), and the 
secondary structure (beta sheet). I could create a PeptideChain  object 
but I couldn't figure out if there's a way to produce a pdb file with 
atomic positions (compare e.g. SwissPDBViewer which creates an ideal 
helix from an aa sequence).

It would be great if anyone could help.

Cheers
Sabine



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