[MMTK] solvation and saving to PDB file

prabhakar g prabha.iisc at googlemail.com
Tue Feb 22 10:51:36 UTC 2011


Dear Dr.Konrad,

Below are the versions of the packages am using.

Python version:2.6
numpy-1.4.1
netcdf-4.0.1
Numeric-23.8.2
ScientificPython-2.8.
MMTK-2.7.0.

Sincerely
prabha

On Sat, Feb 19, 2011 at 2:41 AM, Konrad Hinsen <
research at khinsen.fastmail.net> wrote:

> On 18 Feb, 2011, at 8:42 , prabhakar g wrote:
>
> > Running this script gives the below error and  the system hangs
> >
> > *** glibc detected *** python: malloc(): memory corruption: 0x0a47d4f8
> ***
>
> This kind of error message always indicates one of
>
> 1) A bug (in MMTK or in any of its dependencies, down to Python itself)
>
> 2) A bad installation.
>
> If you can try your script on another machine, please do so, to check for
> installation problems. Otherwise, please tell us which versions of Python,
> NumPy, ScientificPython, and MMTK you are using!
>
> Konrad.
>
> PS: I will be on vacation for a week.
> --
> ---------------------------------------------------------------------
> Konrad Hinsen
> Centre de Biophysique Moléculaire, CNRS Orléans
> Synchrotron Soleil - Division Expériences
> Saint Aubin - BP 48
> 91192 Gif sur Yvette Cedex, France
> Tel. +33-1 69 35 97 15
> E-Mail: research AT khinsen DOT fastmail DOT net
> ---------------------------------------------------------------------
>
>
>
>
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