[MMTK] solvation and saving to PDB file

Konrad Hinsen research at khinsen.fastmail.net
Fri Feb 18 17:41:29 UTC 2011

On 18 Feb, 2011, at 8:42 , prabhakar g wrote:

> Running this script gives the below error and  the system hangs
> *** glibc detected *** python: malloc(): memory corruption: 0x0a47d4f8 ***

This kind of error message always indicates one of

1) A bug (in MMTK or in any of its dependencies, down to Python itself)

2) A bad installation.

If you can try your script on another machine, please do so, to check for installation problems. Otherwise, please tell us which versions of Python, NumPy, ScientificPython, and MMTK you are using!


PS: I will be on vacation for a week.
Konrad Hinsen
Centre de Biophysique Moléculaire, CNRS Orléans
Synchrotron Soleil - Division Expériences
Saint Aubin - BP 48
91192 Gif sur Yvette Cedex, France
Tel. +33-1 69 35 97 15
E-Mail: research AT khinsen DOT fastmail DOT net

More information about the mmtk mailing list