[MMTK] the modified nucleotides in MMTK
dongyi2827 at yahoo.com.hk
Wed Jan 5 11:40:35 UTC 2011
I'm a fresh hand in MMTK and planning to refine a tRNA model which contains
the modified nucleotides.
The model was generated by ModeRNA.
MMTK discarded the the modified nucleotides during refinement.
Although I got the parameter files for the modified nucleotides in Amber
format, I read though the manual and
had no idea how to use and where to put the parameter files in MMTK.
Would you please give any suggestions?
Thanks in advance!
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