[MMTK] the modified nucleotides in MMTK

LIU Changdong dongyi2827 at yahoo.com.hk
Wed Jan 5 11:40:35 UTC 2011


Dear all,
  I'm a fresh hand in MMTK and planning to refine a  tRNA model which contains 
the modified nucleotides.
  The model was generated by ModeRNA.
  MMTK discarded the  the modified nucleotides during refinement.
 Although I got the parameter files for   the modified nucleotides in Amber 
format, I read though the manual and
  had no idea how to use and where to put the parameter files in MMTK.

Would you please give any suggestions?

Thanks in advance!

Best
Dong



      
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