[MMTK] MMTK for plasmas?

Mark Heslep mark at mitre.org
Mon Feb 12 16:29:43 UTC 2007


Arg, my fault!   In hacking the setup.py for the header paths I fat 
finger deleted the atoms path line.  Sorry for the trouble.

Has anyone announced packaging MMTK for Fedora? Someone more nimbly 
fingered than myself, hopefully.

Mark

2. Installation/Examples.  Have MMTK 2.5.16, have it compile and
>> installed on Fedora Core 6 after patching setup.py to find netcdf
>> include headers and libs.  Now 'import MMTK' works, but most all of the
>> examples fail immediately with
>>> IOError: Database entry Atoms/ar not found
>> or similar from ../MMTK/Database.py line 51 in databasePath.
>>
>> The manual suggests no database manipulation is required for default
>> operation but this suggests I need some Atom entries, in my local
>> database path?
>
> They should be there. If they aren't, then something went wrong during 
> installation or configuration.
>
> Please check the following (in Python):
>
>     from MMTK.Database import path
>     print path
>
> This should print a list containing a single element that ends in
> 'site-packages/MMTK/Database'. In that directory, you should find a 
> directory "Atoms" containing all the atom definitions, including "ar".
>
> If "print path" yields anything else, then you have probably set the 
> environment variable MMTKDATABASE to something wrong. Note that you do 
> not need to set it at all if you use just the default database.
>
> Konrad.
> -- 
> ---------------------------------------------------------------------
> Konrad Hinsen
> Centre de Biophysique Moléculaire, CNRS Orléans
> Synchrotron Soleil - Division Expériences
> Saint Aubin - BP 48
> 91192 Gif sur Yvette Cedex, France
> Tel. +33-1 69 35 97 15
> E-Mail: hinsen at cnrs-orleans.fr
> ---------------------------------------------------------------------
>
>
>
> -- 
> ---------------------------------------------------------------------
> Konrad Hinsen
> Centre de Biophysique Moléculaire, CNRS Orléans
> Synchrotron Soleil - Division Expériences
> Saint Aubin - BP 48
> 91192 Gif sur Yvette Cedex, France
> Tel. +33-1 69 35 97 15
> E-Mail: hinsen at cnrs-orleans.fr
> ---------------------------------------------------------------------
>
>
>




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