apply/findTransformation

[Lutz.Ehrlich@EMBL-Heidelberg.de]

Hi all,


profiling my MMTK-based code, I found that for the particular thing I'm
doing, I used up most of the runtime in the findTransformation; even more
for the applyTransformation call. I'm using this on a protein of ~3000
atoms. As this is just the beginning, I wondered whether anybody had
written a C version of the respective Collection.py methods
(find/applyTransformation) ? With things like LAPACK++, it shouldn't be a
big deal (BTW: Has anybody already linked C++ as a Python extensions?
Where's the gotchas?). If nobody has, I might give it a try...


Cheers,
	Lutz

______________________________________________________________________

Lutz Ehrlich		email:	lutz.ehrlich@embl-heidelberg.de
EMBL			web  :  http://www.embl-heidelberg.de/~ehrlich
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